MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus arlettae
19428wH1_IOV5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 80
bases: 2,607,375 bps
CDS: 2,506
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,580
Total number of protein coding genes annotated/found:
2,506
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5016|JADGMC010000003.1
SEQF5016_01553
Genome Viewer
NA
AA
1491/497
17769-16279
Betaine aldehyde dehydrogenase
SEQF5016|JADGMC010000003.1
SEQF5016_01554
Genome Viewer
NA
AA
558/186
17975-18532
HTH-type transcriptional repressor OpcR
SEQF5016|JADGMC010000003.1
SEQF5016_01555
Genome Viewer
NA
AA
1638/546
20434-18797
Glycine betaine transporter BetL
SEQF5016|JADGMC010000003.1
SEQF5016_01556
Genome Viewer
NA
AA
462/154
21039-21500
hypothetical protein
SEQF5016|JADGMC010000003.1
SEQF5016_01557
Genome Viewer
NA
AA
984/328
22599-21616
scyllo-inositol 2-dehydrogenase (NADP(+)) IolU
SEQF5016|JADGMC010000003.1
SEQF5016_01558
Genome Viewer
NA
AA
726/242
22810-23535
Ubiquinone biosynthesis O-methyltransferase%2C mitochondrial
SEQF5016|JADGMC010000003.1
SEQF5016_01559
Genome Viewer
NA
AA
894/298
23686-24579
Fructose-bisphosphate aldolase class 1
SEQF5016|JADGMC010000003.1
SEQF5016_01560
Genome Viewer
NA
AA
1380/460
26844-25465
putative amino acid permease YhdG
SEQF5016|JADGMC010000003.1
SEQF5016_01561
Genome Viewer
NA
AA
1380/460
28315-26936
Succinate-semialdehyde dehydrogenase [NADP(+)]
SEQF5016|JADGMC010000003.1
SEQF5016_01562
Genome Viewer
NA
AA
1314/438
29722-28409
4-aminobutyrate aminotransferase PuuE
SEQF5016|JADGMC010000003.1
SEQF5016_01563
Genome Viewer
NA
AA
1386/462
31311-29926
HTH-type transcriptional regulatory protein GabR
SEQF5016|JADGMC010000003.1
SEQF5016_01564
Genome Viewer
NA
AA
921/307
32424-31504
Cardiolipin synthase
SEQF5016|JADGMC010000003.1
SEQF5016_01565
Genome Viewer
NA
AA
579/193
33014-32436
Major cardiolipin synthase ClsA
SEQF5016|JADGMC010000003.1
SEQF5016_01566
Genome Viewer
NA
AA
819/273
33959-33141
Putative pyruvate%2C phosphate dikinase regulatory protein
SEQF5016|JADGMC010000003.1
SEQF5016_01567
Genome Viewer
NA
AA
2637/879
36585-33949
Pyruvate%2C phosphate dikinase
SEQF5016|JADGMC010000003.1
SEQF5016_01568
Genome Viewer
NA
AA
1404/468
38316-36913
D-xylose transporter
SEQF5016|JADGMC010000003.1
SEQF5016_01569
Genome Viewer
NA
AA
1422/474
39789-38368
L-arabinose isomerase
SEQF5016|JADGMC010000003.1
SEQF5016_01570
Genome Viewer
NA
AA
696/232
40497-39802
L-ribulose-5-phosphate 4-epimerase AraD
SEQF5016|JADGMC010000003.1
SEQF5016_01571
Genome Viewer
NA
AA
1623/541
42097-40475
Xylulose kinase
SEQF5016|JADGMC010000003.1
SEQF5016_01572
Genome Viewer
NA
AA
1083/361
43318-42236
Arabinose metabolism transcriptional repressor
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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